nCounter® Analysis Systems
The nCounter Pro Analysis System delivers highly reproducible expression data on 800+ targets with zero enzymatic steps using a simple automated workflow that requires only 15 minutes of hands-on time. Compatible with even the most difficult sample types, such as FFPE, you get robust performance that drives biomarker discovery and development.
Multiomics Made Simple with the nCounter® Analysis System
Same sample. Same platform. Same run.
Measure RNA and protein together from the same FFPE or FF sample- in a three-step simple workflow, with results in just three days.
The nCounter Pro has been validated to support a 21 CFR Part 11 environment to track records for successful multi-site studies for oncology biomarker discovery and validation.
Our RNA assay panels are organized by research focus categories, making it easy to select the content that best supports your scientific area.
- Oncology Panels & Assays
- Immunology Products
- Neuroscience Products
- Infectious Disease Products
- Cell & Gene Therapy
- miRNA Expression Panels
- CVD Pathophysiology Panel
All nCounter Protein Panels require use of the nCounter Human Immune Core Protein Panel, which contains 11 key housekeeping genes. Protein Panels can be combined to maximize marker coverage. These panels include carefully selected antibodies against key biomarkers and disease-relevant targets, giving you the flexibility to choose the panel that best matches your experimental needs. Stackable 200-500 plex nCounter Protein Panels can be combined with any nCounter Gene Expression Panel. All nCounter Protein Panels require use of the nCounter Human Immune Core Protein Panel, which contains 11 key housekeeping genes. Protein Panels can be combined to maximize marker coverage.
- Human Immnue Pathways Protein Panel
- Human Tumor Signaling Protein Panel
The nCounter® platform offers the flexibility to tailor assay content and throughput to meet individual project needs with Custom CodeSets, Elements™ and PlexSet™ Reagents…
- Custom CodeSets
- CodeSet Plus
- Element TagSets
- Gene Fusion Panelsand CNV Assays
- Multiomics Solutions
- Panel Plus
- PlexSet Reagents
Find the Right Platform for Your Research
| Platform | CosMx | CellScape | GeoMx | nCounter | PaintScape |
|---|---|---|---|---|---|
| Applications | High fidelity, high sensitivity, subcellular imaging of the whole transcriptome with proteomics for complete pathway-level spatial insights | High fidelity, flexible subcellular proteomics for rapid and quantitative spatial phenotyping | High fidelity, unmatched discovery multiomics to profile from cells to tissue structures for spatial breakthroughs at scale | Rapid and robust targeted RNA and multiomic expression proven for translational and clinical studies | High fidelity, high precision multiplexed direct visualization of spatial organization of the 3D genome |
| Analyte | RNA, protein | Protein, RNA | RNA, protein | miRNA, Protein, RNA | DNA |
| Plex level | Target RNA assays (up to 6000 targets) Whole transcriptome RNA assays Up to 64 proteins |
Targeted protein assays (up to 34 targets) Customizable assays up to 20 |
Targeted RNA assays (up to 2000 targets) Whole transcriptome RNA assays Up to 1200 proteins |
800+ RNA 500+ protein |
Targeted DNA Assays (419+ targets) |
| Resolution | Single-cell Subcellular |
Single-cell Subcellular |
Multicellular (RNA) Single-cell (protein) |
Bulk | Single-nuclei |
| Sample compatibility | FFPE, FF, organoids, cultured cells | FFPE, FF, cell suspension, lysate | FFPE, FF | FFPE, FF, lysate | Human cell lines, FF tissue (coming soon) |
| Data readout | Imaging | Imaging | NGS, nCounter (Direct counting) | nCounter (Direct counting) | Imaging |
